Heatmapper
Expression
Pairwise
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Expression Heatmap Info
Upload a gene, protein, or metabolite expression data file. With the "Upload Multiple Files" option, you can flip through heatmaps from several data files for time series analysis or other comparisons. (Note: This feature does not work with some older web browsers, including Internet Explorer 9 or earlier). Input data can have up to 2,500 rows and 300 columns. See the
Instructions Page
for more information.
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Example 1
Example 2
Example 3
Example File Information
This example dataset is sample input retreived from the website for the Ashley Lab
Heatmap Builder
.
This example dataset is sample input retreived from
this online tutorial
by Yan Cui (ycui2@uthsc.edu).
This example dataset is retreived from
the online supplement
to Eisen et al. (1998), which is a very well known paper about cluster analysis and visualization. The details of how the data was collected are outlined in the paper.
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Scale Type
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Colour Scheme
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Clustering Method
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Average Linkage
Centroid Linkage
Complete Linkage
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Import Existing Clusters
Distance Measurement Method
Euclidean
Pearson
Kendall's Tau
Spearman Rank Correlation
Manhattan
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